STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2261876FAD-binding PCMH-type domain-containing protein. (537 aa)    
Predicted Functional Partners:
C2G38_2148766
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
    
 0.758
C2G38_380034
Oxidoreductase, molybdopterin-binding domain-containing protein.
    
  0.755
C2G38_2300959
Oxidoreductase, molybdopterin-binding domain-containing protein.
    
  0.755
C2G38_1959773
DRIM domain-containing protein.
   
  0.667
C2G38_2263768
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.633
C2G38_2133227
WD40-repeat-containing domain protein.
    
  0.630
C2G38_2185710
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.630
C2G38_1963210
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.630
C2G38_2058552
Fcf1-domain-containing protein.
    
  0.630
C2G38_1951175
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.629
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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