STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_2239856Bestrophin, RFP-TM, chloride channel-domain-containing protein. (381 aa)    
Predicted Functional Partners:
C2G38_2226607
Beta-lactamase-like protein.
    
 0.699
C2G38_1988835
Beta-lactamase-like protein.
    
 0.680
C2G38_1993095
Armadillo-type protein.
    
 0.677
C2G38_2210550
Lysophospholipase.
    
  0.669
C2G38_2253702
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.655
C2G38_1979922
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.655
C2G38_2075403
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.655
C2G38_2149689
Uncharacterized protein.
    
 0.636
C2G38_380034
Oxidoreductase, molybdopterin-binding domain-containing protein.
     
 0.626
C2G38_2300959
Oxidoreductase, molybdopterin-binding domain-containing protein.
     
 0.626
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (24%) [HD]