STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1564830Uncharacterized protein. (83 aa)    
Predicted Functional Partners:
C2G38_2248134
Splicing factor, Prp19-binding domain-containing protein.
   
 0.959
C2G38_2231741
U1-type domain-containing protein.
   
 0.953
C2G38_1948122
Uncharacterized protein.
   
 0.946
C2G38_829332
Ubiquitin-related domain-containing protein.
    
 0.930
C2G38_2165966
RED-like protein N-terminal region-domain-containing protein.
   
 0.903
C2G38_2067779
WD40-repeat-containing domain protein.
   
 0.884
C2G38_2149988
Matrin-type domain-containing protein.
   
 0.873
C2G38_1987308
PRP1 splicing factor, N-terminal-domain-containing protein.
   
 0.870
C2G38_2099952
Uncharacterized protein.
   
 0.859
C2G38_2040791
Expansin module family protein.
   
 0.859
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.