C2G38_2133791 protein (Gigaspora rosea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C2G38_2133791

E1-E2 ATPase-domain-containing protein. (1084 aa)

Predicted Functional Partners:

C2G38_1969109

0.982

C2G38_2087926

0.727

C2G38_2189784

0.533

C2G38_2149548

0.485

C2G38_2149547

0.485

C2G38_1987905

0.485

C2G38_1983705

0.485

C2G38_2205703

0.485

C2G38_2111667

0.485

C2G38_2202720

0.485

Your Current Organism:

Gigaspora rosea

NCBI taxonomy Id: 44941
Other names: G. rosea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2G38_1969109	C2G38_2133791	A0A397V467	A0A397W736	Superoxide dismutase.	E1-E2 ATPase-domain-containing protein.	0.982
C2G38_1983705	C2G38_2133791	A0A397UCA1	A0A397W736	Multicopper oxidase; Belongs to the multicopper oxidase family.	E1-E2 ATPase-domain-containing protein.	0.485
C2G38_1987905	C2G38_2133791	A0A397UBS0	A0A397W736	Multicopper oxidase; Belongs to the multicopper oxidase family.	E1-E2 ATPase-domain-containing protein.	0.485
C2G38_2087926	C2G38_2133791	A0A397V4X7	A0A397W736	Uncharacterized protein.	E1-E2 ATPase-domain-containing protein.	0.727
C2G38_2111667	C2G38_2133791	A0A397ULG7	A0A397W736	Multicopper oxidase; Belongs to the multicopper oxidase family.	E1-E2 ATPase-domain-containing protein.	0.485
C2G38_2133791	C2G38_1969109	A0A397W736	A0A397V467	E1-E2 ATPase-domain-containing protein.	Superoxide dismutase.	0.982
C2G38_2133791	C2G38_1983705	A0A397W736	A0A397UCA1	E1-E2 ATPase-domain-containing protein.	Multicopper oxidase; Belongs to the multicopper oxidase family.	0.485
C2G38_2133791	C2G38_1987905	A0A397W736	A0A397UBS0	E1-E2 ATPase-domain-containing protein.	Multicopper oxidase; Belongs to the multicopper oxidase family.	0.485
C2G38_2133791	C2G38_2087926	A0A397W736	A0A397V4X7	E1-E2 ATPase-domain-containing protein.	Uncharacterized protein.	0.727
C2G38_2133791	C2G38_2111667	A0A397W736	A0A397ULG7	E1-E2 ATPase-domain-containing protein.	Multicopper oxidase; Belongs to the multicopper oxidase family.	0.485
C2G38_2133791	C2G38_2149547	A0A397W736	A0A397U8A4	E1-E2 ATPase-domain-containing protein.	Multicopper oxidase; Belongs to the multicopper oxidase family.	0.485
C2G38_2133791	C2G38_2149548	A0A397W736	A0A397U2V1	E1-E2 ATPase-domain-containing protein.	Multicopper oxidase; Belongs to the multicopper oxidase family.	0.485
C2G38_2133791	C2G38_2189784	A0A397W736	A0A397V4D2	E1-E2 ATPase-domain-containing protein.	HAD-like domain-containing protein.	0.533
C2G38_2133791	C2G38_2202720	A0A397W736	A0A397UNB0	E1-E2 ATPase-domain-containing protein.	Multicopper oxidase; Belongs to the multicopper oxidase family.	0.485
C2G38_2133791	C2G38_2205703	A0A397W736	A0A397UJZ4	E1-E2 ATPase-domain-containing protein.	Multicopper oxidase; Belongs to the multicopper oxidase family.	0.485
C2G38_2149547	C2G38_2133791	A0A397U8A4	A0A397W736	Multicopper oxidase; Belongs to the multicopper oxidase family.	E1-E2 ATPase-domain-containing protein.	0.485
C2G38_2149548	C2G38_2133791	A0A397U2V1	A0A397W736	Multicopper oxidase; Belongs to the multicopper oxidase family.	E1-E2 ATPase-domain-containing protein.	0.485
C2G38_2189784	C2G38_2133791	A0A397V4D2	A0A397W736	HAD-like domain-containing protein.	E1-E2 ATPase-domain-containing protein.	0.533
C2G38_2202720	C2G38_2133791	A0A397UNB0	A0A397W736	Multicopper oxidase; Belongs to the multicopper oxidase family.	E1-E2 ATPase-domain-containing protein.	0.485
C2G38_2205703	C2G38_2133791	A0A397UJZ4	A0A397W736	Multicopper oxidase; Belongs to the multicopper oxidase family.	E1-E2 ATPase-domain-containing protein.	0.485