STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2G38_1371848Peptidyl-tRNA hydrolase. (216 aa)    
Predicted Functional Partners:
C2G38_1957510
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
  
  
 0.872
C2G38_1958905
RF_PROK_I domain-containing protein.
  
  
 0.733
C2G38_2146904
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
   
 
  0.725
C2G38_2198339
TPR_REGION domain-containing protein.
    
  0.605
C2G38_1966003
Asparaginase-domain-containing protein.
    
  0.558
C2G38_2253519
Obg family GTPase CgtA.
  
  
 0.503
C2G38_2272102
Eukaryotic translation initiation factor 5A.
  
  
 0.501
C2G38_2051106
Tyrosine--tRNA ligase.
  
  
 0.495
C2G38_1697561
Uncharacterized protein.
  
  
 0.494
C2G38_1698207
tRNA-lysidine/2-thiocytidine synthase.
  
  
 0.494
Your Current Organism:
Gigaspora rosea
NCBI taxonomy Id: 44941
Other names: G. rosea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.