Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAE_04430Hypothetical protein. (131 aa)    
Predicted Functional Partners:
MAE_04440
Hypothetical protein.
 
     0.954
MAE_16850
Hypothetical protein.
  
     0.772
MAE_20050
Hypothetical protein.
  
     0.768
MAE_31110
Hypothetical protein.
  
     0.753
MAE_30230
Peptidase.
  
     0.750
pilN
Type IV pilus assembly protein.
  
     0.740
MAE_07750
Hypothetical protein.
  
     0.735
MAE_17200
Hypothetical protein.
  
     0.732
MAE_17370
Hypothetical protein.
  
     0.728
MAE_48180
Hypothetical protein.
  
     0.724
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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