STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAE_06930Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. (130 aa)    
Predicted Functional Partners:
MAE_01840
Hypothetical protein.
 
     0.799
ycf84
Hypothetical protein.
 
     0.779
yjgP
Permease; gene:yjgP or yjgQ.
 
     0.775
MAE_29820
Porin type major outer membrane protein; Belongs to the OprB family.
  
     0.774
MAE_27990
Porin type major outer membrane protein; Belongs to the OprB family.
  
     0.771
MAE_06090
Porin type major outer membrane protein; Belongs to the OprB family.
  
     0.765
MAE_39210
Chloroplastic outer envelope membrane protein homolog.
  
     0.763
MAE_10010
Porin type major outer membrane protein; Belongs to the OprB family.
  
     0.756
lpxA
acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
    0.664
MAE_08580
Polysaccharide pyruvyl transferase.
  
     0.653
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.