Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MAE_05960 | phrA | MAE_05960 | MAE_07140 | Hypothetical protein. | DNA photolyase. | 0.505 |
MAE_07130 | phrA | MAE_07130 | MAE_07140 | Unknown protein. | DNA photolyase. | 0.537 |
MAE_25700 | MAE_25720 | MAE_25700 | MAE_25720 | Hypothetical protein. | Deoxyribodipyrimidine photolyase-related protein. | 0.559 |
MAE_25700 | phrA | MAE_25700 | MAE_07140 | Hypothetical protein. | DNA photolyase. | 0.441 |
MAE_25720 | MAE_25700 | MAE_25720 | MAE_25700 | Deoxyribodipyrimidine photolyase-related protein. | Hypothetical protein. | 0.559 |
MAE_25720 | MAE_27900 | MAE_25720 | MAE_27900 | Deoxyribodipyrimidine photolyase-related protein. | Dehydrogenase. | 0.659 |
MAE_25720 | phrA | MAE_25720 | MAE_07140 | Deoxyribodipyrimidine photolyase-related protein. | DNA photolyase. | 0.679 |
MAE_27900 | MAE_25720 | MAE_27900 | MAE_25720 | Dehydrogenase. | Deoxyribodipyrimidine photolyase-related protein. | 0.659 |
MAE_27900 | phrA | MAE_27900 | MAE_07140 | Dehydrogenase. | DNA photolyase. | 0.551 |
infB | phrA | MAE_14330 | MAE_07140 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | DNA photolyase. | 0.424 |
infB | ybeY | MAE_14330 | MAE_39660 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Putative metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.652 |
phrA | MAE_05960 | MAE_07140 | MAE_05960 | DNA photolyase. | Hypothetical protein. | 0.505 |
phrA | MAE_07130 | MAE_07140 | MAE_07130 | DNA photolyase. | Unknown protein. | 0.537 |
phrA | MAE_25700 | MAE_07140 | MAE_25700 | DNA photolyase. | Hypothetical protein. | 0.441 |
phrA | MAE_25720 | MAE_07140 | MAE_25720 | DNA photolyase. | Deoxyribodipyrimidine photolyase-related protein. | 0.679 |
phrA | MAE_27900 | MAE_07140 | MAE_27900 | DNA photolyase. | Dehydrogenase. | 0.551 |
phrA | infB | MAE_07140 | MAE_14330 | DNA photolyase. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.424 |
phrA | ybeY | MAE_07140 | MAE_39660 | DNA photolyase. | Putative metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.424 |
ybeY | infB | MAE_39660 | MAE_14330 | Putative metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.652 |
ybeY | phrA | MAE_39660 | MAE_07140 | Putative metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | DNA photolyase. | 0.424 |