Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cpcT1Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (194 aa)    
Predicted Functional Partners:
cpcF
Phycocyanin alpha-subunit phycocyanobilin lyase.
 
   
 0.906
cpcE
Phycocyanin alpha-subunit phycocyanobilin lyase.
 
   
 0.897
cpcS-3
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.893
apcB
Allophycocyanin beta subunit.
  
   
 0.889
ycf58
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.888
apcA
Allophycocyanin alpha subunit.
  
   
 0.863
apcF
Phycobilisome core component.
  
   
 0.858
cpcC1
Phycobilisome rod linker polypeptide; Belongs to the phycobilisome linker protein family.
 
   
 0.854
apcD
allophycocyanin-B.
  
   
 0.851
cpcB1
Phycocyanin beta subunit.
  
   
 0.849
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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