STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmOCarbon dioxide concentrating mechanism protein. (288 aa)    
Predicted Functional Partners:
ccmL
Carbon dioxide concentrating mechanism protein; Putative carboxysome assembly protein.
 
 
 
 0.979
ccmM
Carbon dioxide concentrating mechanism protein; Putative carboxysome structural protein.
 
 
 
 0.783
MAE_27170
Hypothetical protein.
 
 
 
 0.750
ccmN
Carbon dioxide concentrating mechanism protein; Putative carboxysome assembly protein.
 
 
 
 0.723
rbcX
Possible Rubisco chaperonin.
  
   
 0.693
rbcS
Ribulose bisphosphate carboxylase small subunit.
   
 
 0.681
rbcL
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
     
 0.629
cupB
CO2-hydration protein; gene:cupB or chpX.
  
   
 0.622
MAE_08590
Hypothetical protein.
 
     0.596
ndhF3
NADH dehydrogenase subunit 5; Involved in low CO2-inducible, high affinity CO2 uptake.
      
 0.586
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.