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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAE_09040Putative carotenoid oxygenase. (515 aa)    
Predicted Functional Partners:
crtR
Beta-carotene hydroxylase.
  
   
 0.763
pds
Gene:pds or crtD or crtP; phytoene desaturase.
  
   
 0.759
crtE
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
      
 0.677
glnN
Glutamate--ammonia ligase; Belongs to the glutamine synthetase family.
       0.661
pys
Phytoene synthase; Gene:pys or crtB.
      
 0.591
MAE_42320
Hypothetical protein.
  
   
 0.522
MAE_09060
Unknown protein.
       0.490
MAE_22570
Cytochrome P450.
  
   
 0.423
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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