MAE_09780 protein (Microcystis aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MAE_09780

Hypothetical protein. (399 aa)

Predicted Functional Partners:

MAE_44860

0.781

MAE_29820

0.735

MAE_27990

0.717

yjgP

0.700

ycf84

0.698

MAE_49130

0.668

MAE_31300

0.656

MAE_39210

0.651

MAE_10010

0.647

MAE_06930

0.645

Your Current Organism:

Microcystis aeruginosa

NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MAE_06930	MAE_09780	MAE_06930	MAE_09780	Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Hypothetical protein.	0.645
MAE_06930	MAE_10010	MAE_06930	MAE_10010	Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Porin type major outer membrane protein; Belongs to the OprB family.	0.756
MAE_06930	MAE_27990	MAE_06930	MAE_27990	Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Porin type major outer membrane protein; Belongs to the OprB family.	0.771
MAE_06930	MAE_29820	MAE_06930	MAE_29820	Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Porin type major outer membrane protein; Belongs to the OprB family.	0.774
MAE_06930	MAE_39210	MAE_06930	MAE_39210	Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Chloroplastic outer envelope membrane protein homolog.	0.763
MAE_06930	MAE_44860	MAE_06930	MAE_44860	Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Putative lipid-A-disaccharide synthase.	0.615
MAE_06930	ycf84	MAE_06930	MAE_51250	Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Hypothetical protein.	0.779
MAE_06930	yjgP	MAE_06930	MAE_19630	Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	Permease; gene:yjgP or yjgQ.	0.775
MAE_09780	MAE_06930	MAE_09780	MAE_06930	Hypothetical protein.	Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	0.645
MAE_09780	MAE_10010	MAE_09780	MAE_10010	Hypothetical protein.	Porin type major outer membrane protein; Belongs to the OprB family.	0.647
MAE_09780	MAE_27990	MAE_09780	MAE_27990	Hypothetical protein.	Porin type major outer membrane protein; Belongs to the OprB family.	0.717
MAE_09780	MAE_29820	MAE_09780	MAE_29820	Hypothetical protein.	Porin type major outer membrane protein; Belongs to the OprB family.	0.735
MAE_09780	MAE_31300	MAE_09780	MAE_31300	Hypothetical protein.	NAD-dependent epimerase/dehydratase.	0.656
MAE_09780	MAE_39210	MAE_09780	MAE_39210	Hypothetical protein.	Chloroplastic outer envelope membrane protein homolog.	0.651
MAE_09780	MAE_44860	MAE_09780	MAE_44860	Hypothetical protein.	Putative lipid-A-disaccharide synthase.	0.781
MAE_09780	MAE_49130	MAE_09780	MAE_49130	Hypothetical protein.	Probable glycosyl transferase.	0.668
MAE_09780	ycf84	MAE_09780	MAE_51250	Hypothetical protein.	Hypothetical protein.	0.698
MAE_09780	yjgP	MAE_09780	MAE_19630	Hypothetical protein.	Permease; gene:yjgP or yjgQ.	0.700
MAE_10010	MAE_06930	MAE_10010	MAE_06930	Porin type major outer membrane protein; Belongs to the OprB family.	Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.	0.756
MAE_10010	MAE_09780	MAE_10010	MAE_09780	Porin type major outer membrane protein; Belongs to the OprB family.	Hypothetical protein.	0.647