STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
petHferredoxin-NADP oxidoreductase. (399 aa)    
Predicted Functional Partners:
petF
Ferredoxin; gene:petF or fdx; petF-like protein.
  
 
 
 0.810
psbO
Photosystem II manganese-stabilizing polypeptide.
  
   
 0.797
petF2
Essential for growth.
  
 
 
 0.738
fdx
Ferredoxin; petF-like protein.
  
 
 
 0.706
psbP
Photosystem II oxygen-evolving complex 23K protein.
  
   
 0.705
petF1
Essential for growth.
    
 
 0.702
MAE_09030
Hypothetical protein.
  
     0.626
psaA
P700 apoprotein subunit Ia; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family.
     
 0.592
trxA-2
Thioredoxin; Belongs to the thioredoxin family.
      
 0.591
sir
Ferredoxin-sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
     0.574
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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