STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pysPhytoene synthase; Gene:pys or crtB. (310 aa)    
Predicted Functional Partners:
pds
Gene:pds or crtD or crtP; phytoene desaturase.
  
 0.998
crtE
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.963
crtQ
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
  
 0.962
chlP
Geranylgeranyl hydrogenase.
 
 
 0.898
sds
Solanesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.887
MAE_05960
Hypothetical protein.
 
  
 0.862
crtH
Carotene isomerase.
 
  
 0.852
MAE_25380
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
   
 
 0.824
hoxF
Bidirectional hydrogenase diaphorase subunit.
     
 0.820
crtR
Beta-carotene hydroxylase.
  
  
 0.765
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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