STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndhD5bNADH dehydrogenase subunit 4. (488 aa)    
Predicted Functional Partners:
MAE_23780
Putative multicomponent Na+:H+ antiporter subunit C.
 
 
 0.990
MAE_23740
Hypothetical protein.
 
 0.989
MAE_23700
Hypothetical protein.
 
 
 0.986
MAE_23720
Hypothetical protein.
 
 
 0.982
MAE_23760
Hypothetical protein.
 
 
 0.978
ndhF4
NADH dehydrogenase subunit 5 NdhF4; Involved in constitutive, low affinity CO2 uptake.
 
 
 0.935
ndhF3
NADH dehydrogenase subunit 5; Involved in low CO2-inducible, high affinity CO2 uptake.
 
 
 0.929
MAE_23710
Hypothetical protein.
 
 
 0.925
MAE_23730
Hypothetical protein.
 
   
 0.884
ndhF1
NADH dehydrogenase subunit 5.
 
 
0.817
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.