STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcEPhycocyanin alpha-subunit phycocyanobilin lyase. (270 aa)    
Predicted Functional Partners:
cpcF
Phycocyanin alpha-subunit phycocyanobilin lyase.
 
 
 0.997
cpcA1
Phycocyanin alpha subunit.
 
  
 0.985
cpcC1
Phycobilisome rod linker polypeptide; Belongs to the phycobilisome linker protein family.
 
  
 0.982
cpcG
Phycobilisome rod-core linker polypeptide; Belongs to the phycobilisome linker protein family.
 
 
 0.982
cpcD
Phycobilisome small rod linker polypeptide.
 
  
 0.981
cpcB1
Phycocyanin beta subunit.
 
  
 0.981
cpcA2
Phycocyanin alpha subunit.
 
  
 0.981
cpcB2
Phycocyanin beta subunit.
 
  
 0.981
cpcC2
Phycobilisome rod linker polypeptide; Belongs to the phycobilisome linker protein family.
 
  
 0.979
cpcT1
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.840
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.