STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAE_31440Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family. (306 aa)    
Predicted Functional Partners:
MAE_08530
ABC-transporter permease protein.
  
 0.984
MAE_52810
ABC-3 transport family protein.
  
 0.977
MAE_04690
Manganese transport system ATP-binding protein.
 
  
 0.923
MAE_20770
ABC-transporter ATP-binding protein.
 
  
 0.914
thrS
threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
     
 0.547
rps14
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.541
MAE_31450
Unknown protein.
       0.539
rpl28
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.522
MAE_31420
Unknown protein.
       0.496
cobW
Cobalamin synthesis protein cobW homolog.
 
  
 0.473
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.