Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pilAType 4 pilin-like protein. (97 aa)    
Predicted Functional Partners:
MAE_23280
Unknown protein.
  
 
 0.851
pilC
Pilin biogenesis protein; Required for twitching motility.
  
  
 0.847
pilB
Pilus biogenesis protein; Homologous to general secretion pathway protein E.
  
 
 0.741
MAE_53780
General secretion pathway protein E.
  
 
 0.741
comE
Competence protein.
  
  
 0.667
MAE_35730
Unknown protein.
       0.524
MAE_57525
Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.506
MAE_02780
SMF family DNA processing protein.
  
  
 0.410
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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