STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAE_36270Glucose dehydrogenase-B. (63 aa)    
Predicted Functional Partners:
MAE_36250
Glucose dehydrogenase-B.
     0.957
MAE_36290
Glucose dehydrogenase-B.
     0.915
MAE_23670
Hypothetical protein.
  
     0.554
MAE_36260
Transposase.
       0.531
MAE_58610
Short-chain dehydrogenase.
  
     0.524
MAE_45150
Hypothetical protein.
  
     0.514
MAE_54890
DMT superfamily permease protein.
  
     0.470
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.