Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ictBIntegral membrane protein; Required for bicarbonate uptake. (463 aa)    
Predicted Functional Partners:
cupB
CO2-hydration protein; gene:cupB or chpX.
  
   
 0.761
MAE_46800
Hypothetical protein.
 
     0.742
cupA
CO2-hydration protein; Involved in low CO2-inducible, high affinity CO2 uptake.
  
   
 0.705
MAE_13020
Hypothetical protein.
  
     0.703
MAE_13030
Glycosyl transferase.
 
  
 0.699
ccmN
Carbon dioxide concentrating mechanism protein; Putative carboxysome assembly protein.
  
   
 0.633
MAE_38700
Hypothetical protein.
  
     0.599
MAE_06805
Hypothetical protein.
  
     0.578
MAE_08580
Polysaccharide pyruvyl transferase.
 
     0.574
cobL
Precorrin decarbocylase.
  
     0.569
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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