STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemLGlutamate-1-semialdehyde aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. (433 aa)    
Predicted Functional Partners:
hemA
Transfer RNA-Gln reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
 0.992
hemB
5-aminolevulinate dehydratase; Porphobilinogen synthase; Belongs to the ALAD family.
 
 
 0.987
hemB-2
Porphobilinogen synthase; 5-aminolevulinate dehydratase; Belongs to the ALAD family.
 
 
 0.987
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
  
 0.963
MAE_27800
Hypothetical protein; Similar to polyketide synthase.
    
 0.936
mcnB
McnB protein.
  
 
 0.925
mcyC
McyC protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.924
MAE_27810
Short-chain dehydrogenase/reductase.
    
 0.920
MAE_56520
Non-ribosomal peptide synthetase.
  
 
 0.916
MAE_56580
Peptide synthetase.
  
 
 0.910
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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