STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAE_39700Phycocyanin operon protein W. (396 aa)    
Predicted Functional Partners:
apcD
allophycocyanin-B.
  
   
 0.783
apcF
Phycobilisome core component.
  
   
 0.777
cpcB1
Phycocyanin beta subunit.
  
   
 0.777
cpcB2
Phycocyanin beta subunit.
  
   
 0.777
apcC
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
     0.774
apcB
Allophycocyanin beta subunit.
  
   
 0.774
cpcA1
Phycocyanin alpha subunit.
  
     0.774
cpcT1
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.773
cpcC2
Phycobilisome rod linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.773
cpcA2
Phycocyanin alpha subunit.
  
     0.773
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.