Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MAE_05240 | MAE_21110 | Extracellular solute-binding protein. | ABC-transporter permease protein. | 0.864 |
MAE_05240 | MAE_25130 | Extracellular solute-binding protein. | Extracellular solute-binding protein. | 0.501 |
MAE_05240 | MAE_25140 | Extracellular solute-binding protein. | ABC-transporter permease protein. | 0.864 |
MAE_05240 | MAE_40620 | Extracellular solute-binding protein. | Oligopeptides ABC-transporter permease protein. | 0.870 |
MAE_05240 | MAE_41380 | Extracellular solute-binding protein. | Oligopeptides ABC-transporter permease protein. | 0.856 |
MAE_05240 | MAE_45910 | Extracellular solute-binding protein. | Extracellular solute-binding protein. | 0.547 |
MAE_05240 | MAE_45960 | Extracellular solute-binding protein. | ABC-transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.603 |
MAE_05240 | MAE_53170 | Extracellular solute-binding protein. | ABC-transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.544 |
MAE_12460 | MAE_41380 | iron(III)-transport ATP-binding protein; Belongs to the ABC transporter superfamily. | Oligopeptides ABC-transporter permease protein. | 0.579 |
MAE_21110 | MAE_05240 | ABC-transporter permease protein. | Extracellular solute-binding protein. | 0.864 |
MAE_21110 | MAE_25130 | ABC-transporter permease protein. | Extracellular solute-binding protein. | 0.694 |
MAE_21110 | MAE_41380 | ABC-transporter permease protein. | Oligopeptides ABC-transporter permease protein. | 0.908 |
MAE_21110 | MAE_45910 | ABC-transporter permease protein. | Extracellular solute-binding protein. | 0.877 |
MAE_21110 | MAE_45960 | ABC-transporter permease protein. | ABC-transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.909 |
MAE_21110 | MAE_53170 | ABC-transporter permease protein. | ABC-transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.931 |
MAE_21240 | MAE_41380 | ABC-transporter ATP-binding subunit DevA homolog. | Oligopeptides ABC-transporter permease protein. | 0.660 |
MAE_25130 | MAE_05240 | Extracellular solute-binding protein. | Extracellular solute-binding protein. | 0.501 |
MAE_25130 | MAE_21110 | Extracellular solute-binding protein. | ABC-transporter permease protein. | 0.694 |
MAE_25130 | MAE_25140 | Extracellular solute-binding protein. | ABC-transporter permease protein. | 0.968 |
MAE_25130 | MAE_40620 | Extracellular solute-binding protein. | Oligopeptides ABC-transporter permease protein. | 0.755 |
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