STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAE_41490Glucosyltransferase. (174 aa)    
Predicted Functional Partners:
cpsF
Polysaccharide biosynthesis protein.
   
 0.982
MAE_41500
Unknown protein.
       0.664
MAE_29180
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
     0.609
MAE_41520
Lipopolysaccharide biosynthesis protein.
 
   
 0.576
cysK
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.571
MAE_17060
Threonine synthase.
      
 0.571
sir
Ferredoxin-sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
      
 0.571
cysM
Cysteine synthase.
      
 0.571
rsgA
Probable GTPase engC protein 1; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
      
 0.571
cysK-2
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
      
 0.571
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.