STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAE_41520Lipopolysaccharide biosynthesis protein. (705 aa)    
Predicted Functional Partners:
MAE_41410
Putative capsule polysaccharide export protein precursor.
 
 
 0.989
MAE_37150
Polysaccharide export protein.
 
 
 0.984
MAE_26050
Anti-sigma-factor antagonist and sugar transfersase.
 
  
 0.945
MAE_11190
Undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.924
hoxF
Bidirectional hydrogenase diaphorase subunit.
     
 0.872
MAE_41510
Probable glycosyl transferase.
 
  
 0.865
MAE_12350
Polysaccharide biosynthesis protein CapD homolog.
 
  
 0.858
MAE_41540
Unknown protein.
 
  
 0.818
MAE_41560
O-antigen polymerase.
 
  
 0.777
MAE_41550
Probable glycosyl transferase.
 
  
 0.721
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.