STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcFGlycolate oxidase Fe-S subunit. (451 aa)    
Predicted Functional Partners:
glcE
Glycolate oxidase subunit.
 
 0.999
glcD
Glycolate oxidase subunit.
 
 0.999
MAE_50490
Phosphoglycolate phosphatase.
    
 0.902
MAE_61210
HAD-superfamily hydrolase subfamily IA, variant 3.
    
 0.902
MAE_38140
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
  
 0.731
MAE_30070
FAD linked oxidase-like protein.
 
  
 0.576
pmgA
Photomixotrophic growth related protein.
      
 0.570
putA
Proline oxidase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.543
ccmN
Carbon dioxide concentrating mechanism protein; Putative carboxysome assembly protein.
     
 0.540
MAE_44330
Unknown protein.
       0.520
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.