STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcEGlycolate oxidase subunit. (428 aa)    
Predicted Functional Partners:
glcF
Glycolate oxidase Fe-S subunit.
 
 0.999
glcD
Glycolate oxidase subunit.
  
  
 
0.929
MAE_50490
Phosphoglycolate phosphatase.
    
 0.904
MAE_61210
HAD-superfamily hydrolase subfamily IA, variant 3.
    
 0.904
hoxF
Bidirectional hydrogenase diaphorase subunit.
   
   0.739
gltB
NADH-dependent glutamate synthase large subunit.
     
 0.629
MAE_30070
FAD linked oxidase-like protein.
  
     0.596
pmgA
Photomixotrophic growth related protein.
      
 0.570
ccmN
Carbon dioxide concentrating mechanism protein; Putative carboxysome assembly protein.
      
 0.570
phaA
PHA-specific beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.534
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.