STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilA-2Pilin polypeptide. (168 aa)    
Predicted Functional Partners:
pilT
Twitching motility protein.
  
   
 0.745
pilB
Pilus biogenesis protein; Homologous to general secretion pathway protein E.
  
   
 0.742
pilT-2
Twitching mobility protein.
  
   
 0.737
pilC
Pilin biogenesis protein; Required for twitching motility.
  
   
 0.717
pilM
Type IV pilus assembly protein.
  
   
 0.688
pilQ
Type IV pilus assembly protein.
  
   
 0.659
pilN
Type IV pilus assembly protein.
  
   
 0.635
tatA
Twin-arginine translocation protein like; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
      
 0.571
sigF
Group 3 RNA polymerase sigma factor; Belongs to the sigma-70 factor family.
      
 0.571
tatA-2
Putative TatA protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
      
 0.571
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.