STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilA-3Pilin polypeptide. (174 aa)    
Predicted Functional Partners:
pilC
Pilin biogenesis protein; Required for twitching motility.
 
  
 0.963
pilB
Pilus biogenesis protein; Homologous to general secretion pathway protein E.
 
 
 0.961
MAE_23280
Unknown protein.
  
 
 0.901
pilT
Twitching motility protein.
 
   
 0.894
pilT-2
Twitching mobility protein.
 
   
 0.891
MAE_57525
Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.880
pilM
Type IV pilus assembly protein.
 
  
 0.797
pilQ
Type IV pilus assembly protein.
 
   
 0.765
comE
Competence protein.
  
  
 0.700
MAE_53780
General secretion pathway protein E.
  
 
 0.692
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.