STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apcEPhycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family. (901 aa)    
Predicted Functional Partners:
apcC
Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
 
 
 0.999
apcF
Phycobilisome core component.
  
 
 0.999
apcB
Allophycocyanin beta subunit.
 
 
 0.998
apcD
allophycocyanin-B.
 
 
 0.998
apcA
Allophycocyanin alpha subunit.
 
 
0.996
cpcG
Phycobilisome rod-core linker polypeptide; Belongs to the phycobilisome linker protein family.
  
 
 
0.948
cpcA1
Phycocyanin alpha subunit.
  
 
 
 0.946
cpcB2
Phycocyanin beta subunit.
  
 
 
 0.946
cpcB1
Phycocyanin beta subunit.
  
 
 
 0.945
cpcA2
Phycocyanin alpha subunit.
  
 
 
 0.945
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.