Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gifAGlutamine synthetase inactivating factor IF7. (82 aa)    
Predicted Functional Partners:
MAE_49500
Unknown protein.
       0.773
MAE_49510
Hypothetical protein.
       0.773
MAE_49520
Unknown protein.
       0.566
glnA
Glutamate--ammonia ligase.
      
 0.562
ntcA
Global nitrogen regulator Ycf28.
      
 0.499
glnN
Glutamate--ammonia ligase; Belongs to the glutamine synthetase family.
      
 0.482
MAE_29200
Unknown protein.
      
 0.481
MAE_47790
Unknown protein.
      
 0.481
nirA
Ferredoxin--nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
      
 0.480
nirA-2
Ferredoxin--nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
      
 0.480
Your Current Organism:
Microcystis aeruginosa
NCBI taxonomy Id: 449447
Other names: M. aeruginosa NIES-843, Microcystis aeruginosa NIES-843
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