Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MAE_12960 | MAE_38710 | Sodium/sulfate symporter. | Probable chloride channel protein. | 0.408 |
MAE_12960 | MAE_60970 | Sodium/sulfate symporter. | Na+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.525 |
MAE_18660 | MAE_35050 | Trk system potassium uptake protein; TrkH family. | Hypothetical protein. | 0.781 |
MAE_18660 | MAE_52350 | Trk system potassium uptake protein; TrkH family. | rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.457 |
MAE_18660 | MAE_52800 | Trk system potassium uptake protein; TrkH family. | Thioredoxin reductase. | 0.419 |
MAE_18660 | MAE_60970 | Trk system potassium uptake protein; TrkH family. | Na+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.862 |
MAE_23670 | MAE_60970 | Hypothetical protein. | Na+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.581 |
MAE_35050 | MAE_18660 | Hypothetical protein. | Trk system potassium uptake protein; TrkH family. | 0.781 |
MAE_35050 | MAE_38710 | Hypothetical protein. | Probable chloride channel protein. | 0.528 |
MAE_35050 | MAE_52350 | Hypothetical protein. | rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.589 |
MAE_35050 | MAE_52800 | Hypothetical protein. | Thioredoxin reductase. | 0.443 |
MAE_35050 | MAE_60970 | Hypothetical protein. | Na+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.518 |
MAE_38710 | MAE_12960 | Probable chloride channel protein. | Sodium/sulfate symporter. | 0.408 |
MAE_38710 | MAE_35050 | Probable chloride channel protein. | Hypothetical protein. | 0.528 |
MAE_38710 | MAE_52800 | Probable chloride channel protein. | Thioredoxin reductase. | 0.544 |
MAE_38710 | MAE_60970 | Probable chloride channel protein. | Na+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.638 |
MAE_52350 | MAE_18660 | rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Trk system potassium uptake protein; TrkH family. | 0.457 |
MAE_52350 | MAE_35050 | rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Hypothetical protein. | 0.589 |
MAE_52350 | MAE_60970 | rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Na+/H+ antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.570 |
MAE_52800 | MAE_18660 | Thioredoxin reductase. | Trk system potassium uptake protein; TrkH family. | 0.419 |
page 1 of 2