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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO02706.1Teichoic acid biosynthesis protein. (362 aa)    
Predicted Functional Partners:
KRN99173.1
Teichoic acid ABC transporter permease.
 
  
 0.841
nfo
Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
  
    0.797
KRO02101.1
Glycerol-3-phosphate cytidylyltransferase.
 
  
 0.773
KRN99177.1
Minor teichoic acid biosynthesis protein.
 
     0.762
KRN99172.1
Hypothetical protein.
 
     0.750
tagH
Teichoic acid ABC transporter ATP binding protein; Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system.
  
     0.670
KRO02705.1
Hypothetical protein.
       0.521
KRN98806.1
Teichoic acid translocation ATP-binding protein.
  
     0.475
KRN99064.1
Integral membrane protein.
  
     0.448
KRO02099.1
Undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase.
 
 
 0.441
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.