STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO02808.1Phosphomevalonate kinase. (357 aa)    
Predicted Functional Partners:
KRO02807.1
Diphosphomevalonate decarboxylase.
 
 0.999
KRO02806.1
Mevalonate kinase.
 
 
 0.997
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
 0.995
KRO01117.1
hydroxymethylglutaryl-CoA synthase.
 
 
 0.905
KRN98393.1
3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-hydroxy-3-methylglutaryl-coenzyme Auctase; Belongs to the HMG-CoA reductase family.
 
 0.855
KRN98059.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.815
dinG
Ding family atp-dependent helicase yoaa; 3'-5' exonuclease.
       0.553
KRO02804.1
Hypothetical protein.
 
     0.544
KRN98058.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.538
dnaK
Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
   0.512
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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