STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO02812.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
KRN98059.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.802
KRO01027.1
ABC transporter.
 
  
 0.797
KRO02813.1
S9 family serine peptidase.
       0.757
KRO01028.1
SufD protein.
 
   
 0.747
KRO02810.1
23S rRNA m(5)C methyltransferase.
       0.745
KRO02811.1
Hypothetical protein.
     
 0.727
KRO01030.1
Hypothetical protein.
  
    0.721
KRN95952.1
Hypothetical protein.
  
 
 0.640
KRO01031.1
ABC transporter-associated protein.
 
   
 0.596
KRO01029.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.563
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.