Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KRN98044.1Dehydrogenase related protein. (344 aa)    
Predicted Functional Partners:
KRO01089.1
Myo-inositol-1(or 4)-monophosphatase.
  
 
 0.836
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 0.765
KRN98821.1
Oxidoreductase.
 
  
  0.680
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.623
KRN98818.1
UDP-N-acetyl glucosamine-2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.539
KRO01080.1
Hypothetical protein.
   
 0.527
KRO01108.1
Hypothetical protein.
   
 0.524
KRO02770.1
Xylose isomerase domain containing protein TIM barrel.
  
 
 0.523
KRO01680.1
Sugar phosphate isomerase epimerase.
  
 
 0.523
KRO01646.1
Aryl-alcohol dehydrogenase-like protein.
 
 
 0.512
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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