Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN95908.1 | KRN98040.1 | IV66_GL000932 | IV66_GL000329 | Hypothetical protein. | O-acetylhomoserine aminocarboxypropyltransferase. | 0.834 |
KRN95908.1 | KRN98043.1 | IV66_GL000932 | IV66_GL000332 | Hypothetical protein. | Homoserine dehydrogenase. | 0.843 |
KRN95908.1 | KRN98071.1 | IV66_GL000932 | IV66_GL000361 | Hypothetical protein. | Cysteine synthase. | 0.819 |
KRN95908.1 | KRN98072.1 | IV66_GL000932 | IV66_GL000362 | Hypothetical protein. | Cystathionine beta-lyase. | 0.823 |
KRN95908.1 | KRN99561.1 | IV66_GL000932 | IV66_GL001566 | Hypothetical protein. | Aminotransferase. | 0.796 |
KRN95908.1 | luxS | IV66_GL000932 | IV66_GL000557 | Hypothetical protein. | S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.912 |
KRN95908.1 | metAA | IV66_GL000932 | IV66_GL000330 | Hypothetical protein. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.524 |
KRN95908.1 | metG | IV66_GL000932 | IV66_GL002039 | Hypothetical protein. | methionyl-tRNA synthetase protein secretion chaperonin CsaA; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily. | 0.817 |
KRN98040.1 | KRN95908.1 | IV66_GL000329 | IV66_GL000932 | O-acetylhomoserine aminocarboxypropyltransferase. | Hypothetical protein. | 0.834 |
KRN98040.1 | KRN98043.1 | IV66_GL000329 | IV66_GL000332 | O-acetylhomoserine aminocarboxypropyltransferase. | Homoserine dehydrogenase. | 0.948 |
KRN98040.1 | KRN98071.1 | IV66_GL000329 | IV66_GL000361 | O-acetylhomoserine aminocarboxypropyltransferase. | Cysteine synthase. | 0.933 |
KRN98040.1 | KRN98072.1 | IV66_GL000329 | IV66_GL000362 | O-acetylhomoserine aminocarboxypropyltransferase. | Cystathionine beta-lyase. | 0.817 |
KRN98040.1 | KRN98073.1 | IV66_GL000329 | IV66_GL000363 | O-acetylhomoserine aminocarboxypropyltransferase. | Serine O-acetyltransferase. | 0.813 |
KRN98040.1 | KRN99561.1 | IV66_GL000329 | IV66_GL001566 | O-acetylhomoserine aminocarboxypropyltransferase. | Aminotransferase. | 0.929 |
KRN98040.1 | KRO02030.1 | IV66_GL000329 | IV66_GL001698 | O-acetylhomoserine aminocarboxypropyltransferase. | Methionine synthase. | 0.834 |
KRN98040.1 | luxS | IV66_GL000329 | IV66_GL000557 | O-acetylhomoserine aminocarboxypropyltransferase. | S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. | 0.915 |
KRN98040.1 | metAA | IV66_GL000329 | IV66_GL000330 | O-acetylhomoserine aminocarboxypropyltransferase. | Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. | 0.996 |
KRN98043.1 | KRN95908.1 | IV66_GL000332 | IV66_GL000932 | Homoserine dehydrogenase. | Hypothetical protein. | 0.843 |
KRN98043.1 | KRN98040.1 | IV66_GL000332 | IV66_GL000329 | Homoserine dehydrogenase. | O-acetylhomoserine aminocarboxypropyltransferase. | 0.948 |
KRN98043.1 | KRN98071.1 | IV66_GL000332 | IV66_GL000361 | Homoserine dehydrogenase. | Cysteine synthase. | 0.644 |
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