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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN97943.1LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (298 aa)    
Predicted Functional Partners:
KRN95832.1
Transcription regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.671
KRN98031.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.634
KRN95589.1
Transcription regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.622
KRN97942.1
Cytidyltransferase-like domain-containing protein.
     
 0.618
KRN98027.1
Fumarate reductase (flavoprotein).
 
     0.572
KRN99531.1
Hypothetical protein.
 
   
 0.542
KRN98011.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.505
KRN95884.1
DNA polymerase.
  
     0.421
KRN98025.1
Fumarate reductase.
 
     0.419
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.