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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO01337.1Transcription regulator. (248 aa)    
Predicted Functional Partners:
KRN95941.1
Trehalose PTS II ABC.
  
 
 0.869
KRN95942.1
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.869
KRN99812.1
Sugar-specific permease.
  
 
 0.869
KRN99535.1
PTS system sucrose-specific transporter subunit IIABC.
  
 
 0.869
KRN98443.1
Beta-glucosides PTS, EIIBCA.
  
 
 0.869
KRO01338.1
Phosphotransferase system IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.806
KRO01340.1
Sugar kinase.
 
 
 0.637
KRO01190.1
Transcriptional regulator.
  
     0.581
KRN98533.1
Hypothetical protein.
  
     0.520
KRO01005.1
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
 
 0.515
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.