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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN97435.1Cell-division associated ABC transporter, membrane FtsX subunit; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. (297 aa)    
Predicted Functional Partners:
ftsE
Cell-division associated ABC transporter, ATP binding FtsE subunit; Part of the ABC transporter FtsEX involved in cellular division.
 
 0.998
prfB
Bacterial peptide Chain Release Factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
    
 0.770
KRN98177.1
Hypothetical protein.
 
  
 0.706
KRN98084.1
Acetyltransferase.
      0.689
KRN97395.1
Phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
      0.686
KRN97434.1
Hypothetical protein.
 
  
 0.595
KRN97432.1
Two component system histidine kinase.
     
 0.504
KRN97433.1
Alkaline phosphatase synthesis two-component response regulator.
     
 0.502
KRN99166.1
NlpC P60.
 
   
 0.480
KRO01070.1
Cell division initiation protein.
  
  
 0.479
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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