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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN97472.1Di- tripeptide transporter. (488 aa)    
Predicted Functional Partners:
KRN95618.1
NADH-dependent butanol dehydrogenase.
 
    0.549
KRN99985.1
Aminopeptidase N.
  
 
 0.529
KRO02039.1
Acetyltransferase.
  
  
 0.514
KRN95949.1
NADPH quinone reductase related Zn-dependent oxidoreductase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
    0.490
KRN97522.1
Riboflavin biosynthesis protein RibD C-terminal domain-containing protein.
   
    0.487
KRN97377.1
Hypothetical protein.
   
    0.487
KRO02048.1
NADH-flavin reductase.
   
    0.487
lacD
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
   
    0.471
KRO01108.1
Hypothetical protein.
   
  
 0.471
lacD-2
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
   
    0.471
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.