STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO01195.1PTS family mannose porter, IIB component. (158 aa)    
Predicted Functional Partners:
KRO01194.1
PTS family mannose fructose sorbose porter component IIC.
 
 0.975
KRO01193.1
PTS family mannose fructose sorbose porter component IID.
 
 0.960
KRO01299.1
Pts system transporter subunit iid.
 
 0.901
KRO01303.1
PTS system, mannose-specific IID component.
 
 0.900
KRO01291.1
PTS system, mannose-specific IID component.
 
 0.899
KRN99180.1
PTS system mannose fructose sorbose family IID component.
 
 0.899
KRO01284.1
PTS system, mannose fructose sorbose family IID component.
 
 0.893
KRO01192.1
PTS family mannose fructose sorbose porter component IIA.
 
 
 0.892
KRN95905.1
PTS system mannose fructose sorbose family transporter subunit IID.
 
 0.892
KRO01285.1
Phosphotransferase system pts, sorbose-specific iic subunit.
 
 0.891
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.