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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN95797.1Manganese abc transporter atp binding protein. (239 aa)    
Predicted Functional Partners:
KRN95798.1
Manganese abc transporter permease protein.
  
 0.983
KRN98559.1
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.980
KRN95799.1
mtsA protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.975
KRN98560.1
Iron ABC transporter permease.
  
 0.934
KRN98803.1
Hypothetical protein.
  
 0.930
KRN98070.1
Metal ion ABC transporter periplasmic protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.806
KRO01406.1
ABC transporter permease.
 
  
 0.735
KRN98558.1
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.670
KRN95796.1
Hypothetical protein.
       0.584
KRO01405.1
ABC transporter ATP-binding protein.
 
  
0.521
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.