Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRN95814.1NLP P60 protein. (297 aa)    
Predicted Functional Partners:
KRN97435.1
Cell-division associated ABC transporter, membrane FtsX subunit; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.670
KRO02752.1
Carboxy-terminal processing protease; Belongs to the peptidase S41A family.
   
 
 0.649
KRO02701.1
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.642
KRN95815.1
L-2-hydroxyisocaproate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
    0.629
ftsE
Cell-division associated ABC transporter, ATP binding FtsE subunit; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.594
KRN95834.1
L-alanine-DL-glutamate epimerase enolase superfamily-like protein.
 
  
 0.557
KRO02047.1
Hypothetical protein.
 
   
 0.521
KRN95652.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
 0.501
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
 
   
 0.500
KRN95857.1
Lipoprotein.
  
     0.487
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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