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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN95939.1Trehalose 6-P hydrolase. (556 aa)    
Predicted Functional Partners:
KRN95942.1
PTS system beta-glucoside-specific EIIBCA component.
 
 0.967
KRN95941.1
Trehalose PTS II ABC.
  
 
 0.948
KRN99812.1
Sugar-specific permease.
  
 
 0.916
KRN99535.1
PTS system sucrose-specific transporter subunit IIABC.
  
 
 0.916
KRN98443.1
Beta-glucosides PTS, EIIBCA.
  
 
 0.916
KRN95940.1
Trehalose operon transcriptional repressor.
 
  
 0.857
KRN95923.1
Neopullulanase cyclomaltodextrinase maltogenic alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
 
0.765
KRN95919.1
Maltose phosphorylase.
  
 
 0.755
KRN99544.1
Glycoside hydrolase clan GH-D.
  
 
 0.751
KRN97443.1
Amino acid permease.
   
 0.739
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.