Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRN95623.1Peptidoglycan binding protein. (210 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.778
KRN99166.1
NlpC P60.
   
 0.619
KRN97371.1
ComG operon protein 2.
  
 
   0.607
KRN97372.1
ComG operon protein 1.
    
   0.506
KRN98069.1
Hypothetical protein.
 
  
0.505
KRN95559.1
Hypothetical protein.
   
  
 0.467
KRN95560.1
NADPH-dependent FMN reductase.
   
  
 0.467
KRN99150.1
Cro CI family transcriptional regulator.
  
  
  0.457
KRO01659.1
Ferritin Dps family protein; Belongs to the Dps family.
   
  
 0.453
KRN96535.1
Autolysin.
    
 0.452
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.