Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRN95627.1Sugar (glycoside-Pentoside-Hexuronide) transporter. (437 aa)    
Predicted Functional Partners:
KRN95626.1
Hypothetical protein.
 
     0.835
KRN98504.1
Hypothetical protein.
 
     0.612
KRN95628.1
Penicillin V acylase related amidase.
 
     0.513
KRO01683.1
Hypothetical protein.
  
     0.482
KRN99824.1
Hydrolase; Belongs to the 5'-nucleotidase family.
  
  
  0.458
KRN98528.1
Gluconokinase; Belongs to the FGGY kinase family.
  
  
 0.434
KRN97467.1
Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.426
KRN95559.1
Hypothetical protein.
 
     0.420
KRN99546.1
Nucleoside-diphosphate kinase; Belongs to the NDK family.
    
  0.415
KRN98181.1
Deoxyuridine 5-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.
    
  0.407
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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