STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN95639.1Metallo-beta-lactamase family protein; Belongs to the UPF0173 family. (225 aa)    
Predicted Functional Partners:
KRO01677.1
3-hexulose-6-phosphate synthase.
    
 0.622
KRN98528.1
Gluconokinase; Belongs to the FGGY kinase family.
 
  
  0.505
KRN98993.1
Hypothetical protein.
  
 
 0.485
KRN98632.1
PTS system galacitol-specific transporter subunit IIB.
  
 
 0.485
KRO02067.1
PTS system, fructose specific IIABC component.
    
 0.466
KRO01643.1
PTS family porter fructose-specific component IIB.
    
 0.466
KRN98992.1
Galactitol pts, eiia.
    
 0.453
KRN98631.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA, galactitol specific.
    
 0.453
rhaB
Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.
    
  0.440
KRN98590.1
L-ribulokinase.
    
  0.436
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.