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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN95650.1Two component response regulator. (229 aa)    
Predicted Functional Partners:
KRN95651.1
Two component system histidine kinase.
 0.992
KRO02078.1
ATPase histidine kinase DNA gyrase B HSP90 domain protein.
 0.976
KRN97432.1
Two component system histidine kinase.
 0.957
KRO01691.1
Two component sensor kinase.
 0.946
KRO01114.1
Transmembrane histidine kinase.
 0.935
KRO02727.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.784
KRO02663.1
Riboflavin kinase FMN adenylyltransferase; Belongs to the ribF family.
 
   
 0.716
KRN95652.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.633
KRN98055.1
Hypothetical protein.
  
 0.586
KRN95566.1
Hypothetical protein.
 
 
 0.574
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.