STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN95652.1D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (454 aa)    
Predicted Functional Partners:
KRO02799.1
Penicillin-binding protein 1A.
  
 
 0.924
KRN96508.1
Multimodular transpeptidase-transglycosylase PBP 2A.
  
 
 0.924
KRO02701.1
N-acetylmuramoyl-L-alanine amidase.
   
 
 0.849
KRO01060.1
Penicillin binding protein 2B.
 
 
 0.742
KRO02629.1
Non-specific serine threonine protein kinase.
  
 
 0.678
KRO00630.1
Penicillin-binding protein.
  
 
 0.677
KRO02752.1
Carboxy-terminal processing protease; Belongs to the peptidase S41A family.
  
 0.656
KRN95651.1
Two component system histidine kinase.
  
  
 0.650
KRN95650.1
Two component response regulator.
  
  
 0.633
KRN99166.1
NlpC P60.
  
 
 0.626
Your Current Organism:
Lactobacillus pobuzihii
NCBI taxonomy Id: 449659
Other names: JCM 18084, KCTC 13174, L. pobuzihii, Lactobacillus pobuzihii Chen et al. 2010, NBRC 103219, RIFY 6501, strain E100301
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.